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  1. A Semantic Web-based Quality Assurance Tool for Cancer Study Common Data Elements

    16 Jun 2015 | Presentations | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    A poster presentation from the caCDE-QA project (PI: Jiang)  

  2. Accelerating Nanotech Innovations Through a Safer-By-Design Approach, Safer Nanomaterials School

    14 May 2019 | Presentations

    Nano WG May 9, 2019European Scientific Institute (ESI) Safer Nanomaterials School Introduction.

  3. Activities to Promote Technology Research Collaborations (APTRC) PA-17-143 Pre-Application Webinar

    24 Feb 2017 | Presentations | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    Pre-application seminar held February 24, 2017 for FOA PA-17-143 

  4. Advances in the reliability of nanotoxicity assays

    27 Feb 2020 | Presentations

    Nano WG February 20, 2020Abstract: With the increasing usage of nanotechnology in consumer products, it is important to develop accurate methods to assess the potential adverse effects of engineered nanomaterials (ENMs) on humans or environmentally important organisms. However, many of these...

  5. An Extensible and Scalable Knowledge System Architecture for Cancer Research

    06 May 2016 | Presentations | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    ITCR May 2016 PI meeting presentation on development of an advanced knowledge system to capture, share and support reproducible analysis from the biomarker data results.  

  6. ASTM update: minimun ontology proposal

    01 Dec 2016 | Presentations

    Nano WG Meeting December 1, 2016. •  Review of interac+ons between ASTM and Nanoinforma+cs Roadmaps •  Status of ASTM ‘minimum ontology’ proposal •  Discussion of best means of iden+fying a “neutral, core, basic, minimum” ontology that is...

  7. caNanoLab Overview

    05 Jul 2017 | Presentations

    General Overview of the caNanoLab data portal: data submission workflow, collaboration features, data sharing and working with Journals and PubMed to share information about data submissions.

  8. CEINT's NanoPHEAT Project : Integrating Exposure and Toxicity Data to Build Risk Forecasting Tools

    16 Apr 2020 | Presentations

    The NanoPHEAT tool (Nano Product Hazard and Exposure Assessment Tool) is built to compile dose-response curves from literature, including hundreds of papers, and calculates the estimated exposure to nanoparticles as released from real products, based on some in-house experimental values that we...

  9. CEINT's NanoPHEAT Project : Integrating Exposure and Toxicity Data to Build Risk Forecasting Tools

    16 Apr 2020 | Presentations

    The NanoPHEAT tool (Nano Product Hazard and Exposure Assessment Tool) is built to compile dose-response curves from literature, including hundreds of papers, and calculates the estimated exposure to nanoparticles as released from real products, based on some in-house experimental values that we...

  10. Community Adoption & Adaptation of ISA-TAB-nano Data Sharing Templates: A brief overview, next steps at CEINT, and an open discussion of priority actions

    09 Feb 2017 | Presentations

    Nano WG meeting on February 2nd, 2017 ISA-TAB-Nano Next Steps 

  11. CRAVAT - Cancer-Related Analysis of Variants Toolkit

    23 Jun 2015 | External Applications | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    cravat is a bioinformatics pipeline : ; that performs high-throughput cancer-related analysis of variants. it : ; utilizes three applications: CHASM (Cancer-Specific Analysis of Somatic Mutations), VEST and SVN-Get. More information on these tools is available at CHASM Software.Release...

  12. CRAVAT Introduction Video - Cancer Related Analysis of Variants

    03 Dec 2014 | Teaching Materials | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    This video provides a brief overview of the CRAVAT web service(http://www.cravat.us/).  CRAVAT provides annotation and analysis of cancer mutations. CRAVAT is free, very easy to use, and can handle large volumes of mutations.[[Youtube(xovmIy11Bcs)]]Please switch to 1080 resolution and watch...

  13. Data Collection from the Nanotoxicology Literature Using ISA-TAB-Nano

    21 Jan 2016 | Presentations

    Nano WG meeting January 21, 2016 This is an updated version of the talk originally delivered at the CompNanoTox2015 conference. [1] Marchese Robinson, R.; Richarz, A.N.; Cassano, A.; Cronin, M.T.D; Rallo, R. (2015): Data Collection from the Nanotoxicology Literature Using ISA-TAB-Nano. FigShare....

  14. Data Management: The appproach in NANoREG and ProSafe

    21 Apr 2016 | Presentations

    NANoREG project is working on establishing a common European approach to the regulatory testing of Manufactured Nanomaterials and ProSafe has been designed to coordinate and support the aims of EU member and associated states in their EU and international efforts regarding risk assessment,...

  15. Data Sharing and the Electronic NanoBook (eNanobook)

    20 Nov 2017 | Presentations

    Sustainable research progress in many if not all scientific disciplines critically depends on the existence of robust specialized databases that integrate and structure all available experimental information in the respective fields. The need for such reference databases is especially critical...

  16. Dataset Curation, Assessment of their Quality, and Prediction Model Developments for Safe and Sustainable Nanotechnology (S2NANO)

    29 Nov 2018 | Presentations

    Nano WG November 29, 2018: Tae Hyun Yoon, Prof./CEO/Ph.D., Yoon Idea Lab. Co. Ltd. & Hanyang University In this presentation, I will introduce our recent research outcomes from S2NANO: PredictNANO project, which aimed to bridge the nanosafety knowledge gaps between R&D...

  17. Dataset Curation, Assessment of their Quality, and Prediction Model Developments for Safe and Sustainable Nanotechnology (S2NANO)

    29 Nov 2018 | Presentations

    Nano WG November 29, 2018: Tae Hyun Yoon, Prof./CEO/Ph.D., Yoon Idea Lab. Co. Ltd. & Hanyang University In this presentation, I will introduce our recent research outcomes from S2NANO: PredictNANO project, which aimed to bridge the nanosafety knowledge gaps between R&D...

  18. Development of natural language processing tools for nanoparticle design

    05 Mar 2019 | Presentations

    Nano WG February 28, 2019: In this presentation, an introduction to the application of natural language processing techniques to nanotechnology data will be discussed.  Natural language processing tools can aid in the automatic categorization, extraction, and analysis of data from...

  19. Development of Targeted Nanomedicines via Machine Learning Processes

    05 Mar 2019 | Presentations

    Nano WG February 21, 2019Description: We are using data science to facilitate the development of nanoparticle drugs incorporating kinase inhibitors with diverse chemical structures. Doing this work inspired us to bring together the nanoinformatics community...

  20. Dissolution as a Paradigm in Regulating Nanomaterials

    16 Aug 2017 | Presentations

    Nano WG presentation, August 10, 2017 Themes: • Dissolution as a decision criterion • Analogies to ζ-potential & VSSA • Relation to nanoform & nanoscale form • Dissolution kinetics and artifacts • ASTM particle ontology & Nanoinformatics Roadmap...