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Informatics to enable Routine Personalized Cancer Therapy (IPCT)
18 Feb 2014 | Contributor(s): Elmer V. Bernstam, Funda Meric-Bernstam
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Informatics Tools for High-throughput Analysis of Cancer Mutations
15 Jan 2014 | Contributor(s): Michael C Ryan, Rachel Karchin
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Integrated analysis of breast cancer cell lines reveals unique signaling pathways
16 Sep 2014 | Contributor(s): Laura M Heiser, Nicholas J Wang, Carolyn L Talcott, Keith R Laderoute, Merrill Knapp, Yinghui Guan, Zhi Hu, Safiyyah Ziyad, Barbara L Weber, Sylvie Laquerre, Jeffrey R Jackson, Richard F Wooster, Wen Lin Kuo, Joe W Gray, Paul T Spellman
AbstractBackgroundCancer is a heterogeneous disease resulting from the accumulation of genetic defects that negatively impact control of cell division, motility, adhesion and apoptosis. Deregulation in signaling along the EgfR-MAPK pathway is common in breast cancer, though the manner in which...
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Integrative Cancer Biology Program Datasets
26 Apr 2016 | Series | Contributor(s): Jonathan Bistline, Michael Reich
The NCI-ICBP promotes an integrative/systems approach to the study of cancer biology. The Program encourages scientists to study cancer as a complex biological system. Information gained from these studies are used to build reliable and testable predictive computation models of cancer processes...
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Introduction to the Trinity Cancer Transcriptome Analysis Toolkit
05 Feb 2015 | Teaching Materials | Contributor(s): Brian Haas, Aviv Regev, Bill Barnett
This short video provides an overview of our ITCR-funded effort to leverage RNA-Seq and de novo transcriptome assembly to assist researchers in studying cancer transcriptomes. Visit our NCGAS Trinity/Galaxy portal to access these compute...
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ITCR Monthly Teleconference September 4, 2015
07 Oct 2015 | Presentations | Contributor(s): Juli Klemm
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ITCR PI Meeting June 2014 Presentations
23 Jun 2014 | Series
Informatics Technology for Cancer Research (ITCR) Initiative held its Annual PI Meeting on June 12-13, 2014 in Rockville, MD. This series contains the presentations given at the meeting.
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Jaqpot - An open-source web platform for creating, using, testing and sharing predictive models in nano-informatics
20 Jun 2019 | Presentations | Contributor(s): Haralambos Sarimveis
Nano WG June 20, 2019Computational models that predict physicochemical properties, biokinetics or adverse biological effects of Engineered Nanomaterials (ENMs) are becoming increasingly important to support risk assessment and safety-by-design. This is primarily due to cost-saving and...
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LBL ICBP50 integrative genomic data
13 Nov 2014 | Downloads | Contributor(s): Joe Gray, Jonathan Bistline
From Joe Gray, Lawrence Berkeley National Laboratory. There are seventeen (17) files in this study: Affymetrix U133A gene expression data (icbp_u133a.gct) Affymetrix U133A gene expression data (ICBP_U133a.zip) Affymetrix splice junction exon-exon data (ICBP_Junction.zip) Affymetrix...
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Life after MOOCS: Online Science Education Needs a New Revolution
03 Feb 2017 | Presentations | Contributor(s): Phillip Compeau
ITCR Monthly PI Meeting, February 3, 2017 Presentation by Phillip Compeau (Carnegie Mellon U.)
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Materials Science Data Management Initiatives at NIST
17 Dec 2015 | Presentations | Contributor(s): Robert J. Hanisch
Nano WG December 17, 2015 •NIST is a national and world resource for fundamental data •Access should be easy and open –With regard to IP and privacy issues •As our nation’s standards organization… –NIST should be a leader in national and...
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Molecule & Particle Differentiation Using Electrophoresis
28 Apr 2015 | Presentations | Contributor(s): Frederick C. Klaessig, Sharon Ku
Nano WG April 16, 2015
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Nano a Nature Research Solution
20 Apr 2018 | Presentations | Contributor(s): Prathik Roy, Mervi Heiskanen
Nano.nature.com known as Nano is a non-journal type product under the Nature Research portfolio. It aims to provide highly indexed and structured information related to nanomaterials derived from peer-reviewed journals. These include composition, synthesis, properties, characterization methods...
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Nano WG: Nanoinformatics Roadmap 2020 Update
03 Nov 2016 | Presentations | Contributor(s): Andrea Haas, Frederick C. Klaessig
Nano WG weekly meeting November 3, 2016.Update on the Nanoinformatics 2020 Roadmap Activities by Andrea Haas and Fred Klaessig.
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Nano, - A Nature Research Solution
27 Feb 2017 | Presentations | Contributor(s): Prathik Roy
Nano.nature.com known as Nano is a non-journal type product under the Nature Research portfolio. It aims to provide highly indexed and structured information related to nanomaterials derived from peer-reviewed journals. These include composition, synthesis, properties, characterization methods...
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Nanoinformatics and the nanomaterial research community: Strategies for Sharing and Convergence
29 Mar 2018 | Presentations | Contributor(s): Christine Ogilvie Hendren, Mervi Heiskanen
Nano WG Presentation March 27, 2018 Christine Ogilvie Hendren, Jaleesa Amos (CEINT) Camille de Garidel-Thoron (Serenade) Claus Svendsen, Tassos Papadiamantis (NanoFASE) Iseult Lynch, Marianne Matzke (NanoCommons)
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NanoInformatics Knowledge Commons Curation Team: Building the Data Dictionary to Enrich Data Curation
11 Jul 2018 | Presentations | Contributor(s): Jaleesia Amos, Yuan Tian, Mervi Heiskanen
Nano WG Presentation, May 31st, 2018 Organized storing of data using informed-decision making to determine what information should be curated, when data curation is complete, and how to identify high-quality data. Purpose of NIKC structure & curation process: tell the story of...
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NanoInformatics Knowledge Commons US-EU Data Integration Team: A Collaborative Approach to Building Rich Datasets
14 Feb 2018 | Presentations | Contributor(s): Jaleesia Amos, Camille de Garidel-Thoron, Tassos Papadiamantis, Mervi Heiskanen
Nano WG Presentation February 8, 2018CEINT, NanoFase, CEREGE: Creating interoperability through data curation
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Nanoinformatics Roadmap and Modeling
13 Mar 2018 | Presentations | Contributor(s): Frederick C. Klaessig
Nano WG March 1, 2018 by Fread Klaessig:US EU Roadmap StatusDefinition of DatabaseTreatment of materials modeling and QSARs
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Nanoinformatics Workshop 2015
23 Mar 2015 | Presentations | Contributor(s): Mark Tuominen, Mervi Heiskanen
Nano WG March 19, 2015.