Overview: The HUBzero Platform for Scientific Collaboration

18 Dec 2013 | Presentations | Contributor(s): Michael McLennan

This web site was created using a collaborative infrastructure called HUBzero, developed by Purdue University. HUBzero is the basis of nanoHUB.org and more than 50 other sites covering a wide range of scientific disciplines, including bio-fuels, microelectromechanical systems, cancer research,...

Patient Stories

30 Nov 2015 | Teaching Materials | Contributor(s): Diane Townsel

Beaumont’s Patient videos: is the story of five patients that have participated in clinical research or have been a part of a bio-specimen study. The videos tell the unique stories of our patients and how our Cancer Clinical Trials staff build relationships with our patients and guide them...

Por Nuestras Hijas/For Our Daughters HPV Program

24 Nov 2015 | Teaching Materials | Contributor(s): Maria E. Fernandez

The Por Nuestras Hijas/For Our Daughters HPV program is an interactive, culturally appropriate HPV education program which includes a print fotonovela and a tailored interactive multimedia intervention (TIMI). The TIMI runs on iPads and also available on the web and mobile platforms. The program...

Providing National Cyberinfrastructure to Biologists, esp. Genomicists

02 Sep 2016 | Presentations | Contributor(s): Tom Doek, Mervi Heiskanen

National Center for Genome Analysis Support (NCGAS) provides access to High Performance Computing resources for biologists. NCGAS also maintains a curated set of applications and Galaxy instances of their software, as well as provides bioinformatics expertise.

QIN HUBzero update

28 Oct 2013 | Teaching Materials | Contributor(s): Jayashree Kalpathy-Cramer

presentation for the QIN EC meeting 10/21/2013

Quantitative Image Informatics for Cancer Research (QIICR)

04 Apr 2014 | Presentations | Contributor(s): Andrey Fedorov, Ron Kikinis

Text Messaging and Phone Calls as Tools to Promote Healthy Behaviors among Hispanic Populations

24 Nov 2015 | Teaching Materials | Contributor(s): Laura Leticia Nervi, Barbara Damron, Maria Otero, Andrew Sussman, Dolores Guest

Title: Text Messaging and Phone Calls as Tools to Promote Healthy Behaviors among Hispanic Populations   Objectives: The primary aim of this project was to evaluate the use of text messaging and phone calls to motivate Hispanic adult males and females to increase their daily physical...

Text Messaging as a Method to Increase Oral Chemotherapy Adherence in Hispanic Cancer Populations

23 Nov 2015 | Teaching Materials | Contributor(s): Laura Leticia Nervi, Barbara Damron, Andrew Sussman, Dolores Guest

Title: Text Messaging as a Method to Increase Oral Chemotherapy Adherence in Hispanic Cancer Populations:  Patient and Provider Feasibility Surveys Objectives: The purpose of this study was to explore the feasibility of conducting an interventional study to evaluate the effectiveness of text...

The Boston Medical Center Patient Navigation Toolkit

22 Dec 2015 | Downloads

The BMC Toolkit offers case studies, tools and resources from cancer care navigation that can be applied to reduce the impact of the target disease, health disparities, and barriers to care unique to your own community. For Program Planners, Volume 1: Developing your Patient Navigation...

The Digital Slide Archive

13 Jun 2017 | Presentations | Contributor(s): David A Gutman, Lee Cooper

Presentation at the 2017 Informatics Technology for Cancer Research Annual Meeting Advanced development of an open-source platform for web-based integrative digital image analysis in cancer.

The history of chemical information and the materials of the future

25 Apr 2019 | Presentations | Contributor(s): Evan Hepler-Smith

Techniques, technologies, cultures, and infrastructures of information management played a central role in the development of the modern chemical sciences and the global chemicals industry since the late 19th century. Chemical databases and analytical techniques that privileged abstract,...

The World of HUBzero

11 Feb 2015 | Presentations | Contributor(s): Michael McLennan

This part of a demo/presentation from the Force2015 conference giving you a 9 1/2 minute overview of the HUBzero platform and its capabilities - NCIP Hub is based on the HUBzero platform.[[Youtube(p_hpwoiXvEE,300,200)]]

Tools for Creation of Integrated Data Repository for Cancer Research

16 Jun 2015 | Presentations | Contributor(s): Guoqian Jiang

Admin Supplement Proposal Parent Projects: DeepPhe (PIs: Savova and Jacobson) caCDE-QA (PI: Jiang)

Tools to Analyze Morphology and Spatially Mapped Molecular Data

03 Oct 2014 | Presentations | Contributor(s): Joel Saltz

Transitioning to Predictive Analysis for Nanoparticle Biocorona Studies

14 May 2019 | Presentations | Contributor(s): Korin Wheeler

Nano WG April 18, 2019: Proteins adsorbed to nanomaterials in a biological environment mediate cellular recognition, uptake, and toxicity of nanomaterials. Here, Dr. Korin Wheeler presents the development of experimental methods to characterize this population of proteins (also...

Trinity: RNA-Seq De novo Assembly Application

30 Jun 2015 | External Applications | Contributor(s): Grabherr MG, Brian Haas, Yassour M, Levin JZ, Thompson DA, Amit I, Adiconis X, Fan L, Raychowdhury R, Zeng Q, Chen Z, Mauceli E, Hacohen N, Gnirke A, Rhind N, Di Palma F, Birren BW, Nusbaum C, Lindblad-toh K, Friedman N, Regev A

 Quick Guide for the ImpatientTrinity assembles transcript sequences from Illumina RNA-Seq data.Download Trinity here.Build Trinity by typing make : ; in the base installation directory.Assemble RNA-Seq data like so:Trinity --seqType fq --left reads_1.fq --right reads_2.fq...

Understanding Colorectal Cancer to Protect our Communities

24 Nov 2015 | Teaching Materials | Contributor(s): NCI

This is a teaching material originally developed by NCI.