What's New: Past Quarter

Knowledge Base feed

  1. How do I filter NCIPhub emails?

    There are several ways that you can filter emails from the Hub depending on where those emails are coming from.If you are wanting to filter emails from a specific group, such as emails from a group...


  2. Can I use SFTP to upload large files to a project?

    Find documentation on how to utilize the SFTP functionality here.


  3. DIgital Object Identifier

    What is a DOI?A DOI is a serial code used to uniquely identify digital assets. The Digital Object Identifier (DOI®) System is used to identify digital resources when referencing them in...


  4. How does federated login work?

    You can choose to log into the hub using credentials from another authorizing party. This could be a web service provided by a company like Google or Facebook, or it could be a service provided by...


  5. How do I update a Database?

    Change the Database FileNavigate to https://yourhub.org/projects.  Click on the Project that contains the Database that needs updating.  Click on “Databases” underneath Assets...


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Resources feed

  1. CAFCW115 Massively Parallel Large-Scale Multi-Model Simulation of Tumor Development including Treatments

    19 Dec 2019 | Contributor(s):: Marco Berghoff, Jakob Rosenbauer, Alexander Schug

    The temporal and spatial resolution in the microscopy of tissues has increased significantly within the last years, yielding new insights into the dynamics of tissue development and the role of the single-cell within it. A thorough theoretical description of the connection of single-cell...

  2. CAFCW117 A Scalable, Validated Platform for Generative Lead Optimization of De Novo Molecules: Case Study in Discovery of Potent, Selective Aurora Kinase Inhibitors with Favorable Secondary Pharmacology

    19 Dec 2019 | Contributor(s):: Andrew Weber

    De Novo design of therapeutic agents is currently a slow, expensive process generally relying on a large high throughput screen and several follow up cycles of iterative design to enhance the potency, eliminate safety liabilities, and enable favorable pharmacokinetic behavior. Computer aided drug...

  3. CAFCW 122 Fusion of Structure Based Deep Learning to Accelerate Molecular Docking Predictions

    09 Dec 2019 | Contributor(s):: Derek Jones

    Modeling interactions with biological targets is a necessary step to begin reasoning about the therapeutic potential of a novel molecule in the drug discovery process. Molecular docking aids drug discovery researchers by searching over potential binding ‘poses’ of a drug molecule,...

  4. CAFCW 104 Deep Kernel Learning for Information Extraction from Cancer Pathology Reports

    09 Dec 2019 | Contributor(s):: Devanshu Agrawal, Abhishek Dubey, Georgia Tourassi, Jacob Hinkle

    Cancer pathology reports comprise a rich source of data for surveilling cancer incidents and tracking cancer trends across the United States. Cancer registries manually extract key pieces of information from these reports including tumor site, histology, laterality, behavior, grade, and...

  5. CAFCW 105 Acceleration of Hyperparameter Optimization via Task Parallelism for Information Extraction from Cancer Pathology Reports

    09 Dec 2019 | Contributor(s):: John Gounley, Hong-Jun Yoon

    Recent advances in high-performance computing systems for artificial intelligence enable large-scale training of information extraction models from free-form natural language texts. The development of these models is essential to the cancer surveillance research and automation. In this study, we...

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Wiki Pages feed

  1. HTT update Draft

    Click to get back to HTT updates. Click to the update from 10 January 2020 meeting Update Draft IRB consent form: Signatures not required! Data collection demonstration WebEx


  2. Meetings 20200108

    Back to Meetings & Minutes page Alliance 2020 – February 27 & 28 Agenda – version 2 Rooms – booked, update Invitations – needs and timelines Project Management...


  3. Meetings 20191211

    Back to Meetings & Minutes page Alliance 2020 – February 27 & 28 Agenda Rooms Invitations WEBSITE idea for blog/links page => key item to discuss “maintenance” include...


  4. High-Throughput Truthing Year 3

    Year 3: High-throughput truthing of microscope slides to validate artificial intelligence algorithms analyzing digital scans of pathology slides: data collection to create the medical device...


  5. Admin RCA

    Here are the documents that were submitted to FDA group Partnerships to Advance Innovation & Regulatory Science (PAIRS). Here is basic contact info: GALLAS_T2_Project_Request_Form.pdf (298 KB,...


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Publications feed

  1. HINTS 5 Cycle 2 11.27 27 Nov 2019 | Datasets | Contributor(s): Kelly Blake, Rick P Moser

    this is for the hints 5 cycle 2 11/27


  2. Hints 5 Cycle 2.1 27 Nov 2019 | Datasets | Contributor(s): Kelly Blake

    This is the Hints 5 Cycle 2


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