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Values Of Precision and the Societal Implications Of Data Readiness Levels
19 Jun 2014 | Presentations | Contributor(s): Sharon Ku
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Cloud Supercomputer Aided Diagnostic Imaging Decision Support System
18 Jun 2014 | Presentations | Contributor(s): Hiro Yoshida
ITCR PI meeting presentation on project status.
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Histology Protocols
05 Jun 2014 | Teaching Materials | Contributor(s): Neil Hubbard
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Three transplantable mouse mammary tumor models of human breast cancer were used to assess the effects of fixation on morphology and the preservation of 4 breast antigens (ER, PR, Ki67, Her2).
04 Jun 2014 | Publications | Contributor(s): Neil Hubbard
Quantitative Image Analysis (QIA) of digitized whole slide images for morphometric parameters and immunohistochemistry of breast cancer antigens was used to evaluate the technical reproducibility, biological variability, and intratumoral heterogeneity in three transplantable mouse mammary tumor...
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Why Should You Care About Accessibility of Your Contributed Content?
02 Jun 2014 | Teaching Materials
Most people today can hardly conceive of life without the internet. Some have argued that no other single invention has been more revolutionary since Gutenberg's printing press in the 1400s. Now, at the click of a mouse, the world can be "at your fingertips"—that is, if you...
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Nanocuration update by Christine Hendren
02 Jun 2014 | Presentations | Contributor(s): Christine Ogilvie Hendren
Nanocuration update by Christine Hendren, Nano WG May 29, 2014
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Collections on NCIP Hub
02 Jun 2014 | Teaching Materials | Contributor(s): Ishwar Chandramouliswaran, Lisa Mahoney
NCIP Hub Webinar Series presentation given on April 24, 2014. The presentation explains what collections are, and how and when to use them.
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Tips for creating Standards Group Pages
22 May 2014 | Teaching Materials | Contributor(s): Denise Warzel
The Standards Portal offers a way to organize dsicussions and resources related to a set of standards. The organizing construct can be either a community interested in sharing data or using common tools, or by a particular type of standard, for example demographics or biomarkers. An example of a...
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SIdora: A Software Environment for Supporting Research at the Smithsonian
19 May 2014 | Presentations
The Office of Research Information Services (ORIS) was created, within the Office of the Chief Information Officer (OCIO), to address the needto manage the digital output of all of the research activities of the institution. ORIS has built a first pilot system of SIdora, a general information...
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RAS Clone Collections
16 May 2014 | Series | Contributor(s): Dominic Esposito, James Hartley
Access RAS Clone Collections available today and learn how to use and leverage them in your research.
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KRAS Entry Clone Collection
16 May 2014 | Reagents | Contributor(s): Dominic Esposito
The R3 KRAS Entry Clone Collection #1 is a set of vectors for use with the Gateway Cloning Platform (Life Technologies, Carlsbad, CA) to permit construction of KRAS expression vectors for in vitro and in vivo research. While these clones can be used for standard Gateway cloning, their utility is...
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RAS Pathway Clone Collection
16 May 2014 | Reagents | Contributor(s): Dominic Esposito
The R3 KRAS Pathway Clone Collection #1 is a set of vectors for use with the Gateway cloning platform (Life Technologies, Carlsbad, CA) to permit construction of expression vectors for in vitro and in vivo research. While these clones can be used for standard Gateway cloning, their utility is...
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Development and Application of MRI & PET Methods for Predicting Therapeutic Response of Breast Cancers During Neoadjuvant Chemotherapy
30 Apr 2014 | Teaching Materials | Contributor(s): Xia Li, Lori R. Arlinghaus, Richard G. Abramson, A. Bapsi Chakravarthy, Vandana G. Abramson, Jaime Farley, Hakmook Kang, Jason Williams, Melinda Sanders, Thomas E. Yankeelov
Overall goal:Provide the breast cancer community with acquisition & analysis tools for: integration of PET and MRI data, and early predictive indices of NAC.
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Reproducibility of FDG SUVmax for metastatic breast cancer lesions in the same or different PET/CT scanners in a local network
30 Apr 2014 | Teaching Materials | Contributor(s): Lanell M Peterson, Brenda F. Kurland, Andrew T Shields, Darrin Byrd, Alena Novakova, Rebecca Christopel, Mark Muzi, David A. Mankoff, Hannah M. Linden, Paul Kinahan
Accurate reproducibility of PET SUVs is important for patient management and for clinical trial design. Measuring and reducing SUV variability in PET scanners throughout a local area network can aid in monitoring patient response to therapy and may increase patient accrual to clinical trials
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Quantitative DW-MRI for Early Breast Cancer Treatment Response Assessment
30 Apr 2014 | Teaching Materials | Contributor(s): Brian D. Ross, Craig J. Galbán, Anne Schott, Dariya I. Malyarenko, Ryan Chamberlain, Thomas L. Chenevert
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The University of Iowa: Quantitative Imaging to Assess Response in Cancer Therapy Trials
30 Apr 2014 | Teaching Materials | Contributor(s): John Buatti, Thomas Casavant, Michael Graham, Milan Sonka, John Sunderland, Vincent Magnotta, Terry Braun, Bartley Brown, Reinhard Beichel, Carryn Anderson, Wenqing Sun, Yusuf Menda, Brian Smith, Christian Bauer, Markus Van Tol
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Quantitative Imaging for Assessing Breast Cancer Response to Treatment
30 Apr 2014 | Teaching Materials | Contributor(s): Ella Jones, Lisa Wilmes, David Newitt, Sheye Aliu, Nola Hylton
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Computerized Quantitative Imaging Assessment of Tumor Burden
30 Apr 2014 | Teaching Materials | Contributor(s): Daniel L. Rubin, Sandy Napel, Edward Graves, Andrew Quon, George Fisher, Martin O\'Connor, Debra Willrett, Andrew Evans
We are developing a software framework built on caBIG technologies to standardize quantitative imaging assessment of tumor burden and to enable researchers to integrate and analyze a spectrum of quantitative imaging biomarkers to leverage quantitative imaging to better enable assessment of cancer...
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Quantitative Biomarker Imaging for Early Therapy Response Assessment in Cancer
30 Apr 2014 | Teaching Materials | Contributor(s): James M. Mountz
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The PET/CT Working Group: 2013-2014
30 Apr 2014 | Teaching Materials | Contributor(s): The PET/CT Working Group