How to Get Your Tool Published on NCIP Hub
02 Aug 2017 | Contributor(s): Jonathan Kurianjj
Follow these instructions after you set up your tool in the Resources section to get your tool published on the NCIP Hub (the platform that QIN Hub runs on).
05 Jul 2017 | Presentations | Contributor(s): Stephanie Morris, Mervi Heiskanen
General Overview of the caNanoLab data portal: data submission workflow, collaboration features, data sharing and working with Journals and PubMed to share information about data submissions.
The Digital Slide Archive
13 Jun 2017 | Presentations | Contributor(s): David A Gutman, Lee Cooper
Presentation at the 2017 Informatics Technology for Cancer Research Annual Meeting Advanced development of an open-source platform for web-based integrative digital image analysis in cancer.
The impact of engineered nanomaterials on aquatic species: ISA-TAB compatible dataset mined from literature (2007-2016)
13 Jun 2017 | Presentations | Contributor(s): Anastasios Papadiamantis
Nano WG presentation, June 8, 2017Primary scope of the project was to: Model the toxicity of engineered nanomaterials (ENMs) at multiple levels and design and create a database (DB) containing extracted peer-reviewed published toxicity dataAnalyse the extracted data and identify...
13 Jun 2017 | Publications | Contributor(s): Prasanna Hariharan
PROJECT HOME PUMP(round robin2) FDALinkComputational Round Robin #2 was an international effort to assess the state of the art in biomedical computational fluid dynamics. The subject of Interlaboratory Study 2 is a simplified centrifugal blood pump. We built acrylic versions of...
NANOANALYTICS OF EXTRACELLULAR VESICLES – Standards for isolation, characterization and reporting
26 May 2017 | Presentations | Contributor(s): Shivani Sharma
Nano WG presentation on May 25, 2017. Presentation by Dr. Shivani Sharma, Associate Director of the Nano Pico Characterization Lab, UCLA. Nanoscale characterization of exosomes and their use disease biomarkers and drug delivery agents
European Chemical Agency's work to implement REACH regulation for nanomaterials
04 May 2017 | Presentations | Contributor(s): Frank Le Curieux
Nano WG presentation on May 4, 2017. REACH = Registration, Evaluation, Authorisation (& restriction) of Chemicals aims to ensure a high level of protection of human health and the environment while enhancing competitiveness and innovation. Nano materials are covered by...
NANoREG-Proposed ISA-TAB-Nano Template Expansion
13 Apr 2017 | Presentations | Contributor(s): Nancy Birkner
Nano WG presentation April 13, 2017 by Dr. Nancy Birkner, post-doctoral associate at Duke University working in conjunction with the NanoInformatics Knowledge Commons, presented her progress on reviewing and updating the ISA-TAB-Nano data exchange formats. Dr. Birkner described the evolution of...
Nano, - A Nature Research Solution
27 Feb 2017 | Presentations | Contributor(s): Prathik Roy
Nano.nature.com known as Nano is a non-journal type product under the Nature Research portfolio. It aims to provide highly indexed and structured information related to nanomaterials derived from peer-reviewed journals. These include composition, synthesis, properties, characterization methods...
Activities to Promote Technology Research Collaborations (APTRC) PA-17-143 Pre-Application Webinar
24 Feb 2017 | Presentations | Contributor(s): Juli Klemm, Tony Dickherber
Pre-application seminar held February 24, 2017 for FOA PA-17-143
15 Feb 2017 | External Applications | Contributor(s): Schultz
This is a link to CBioPortal
Community Adoption & Adaptation of ISA-TAB-nano Data Sharing Templates: A brief overview, next steps at CEINT, and an open discussion of priority actions
09 Feb 2017 | Presentations | Contributor(s): Christine Ogilvie Hendren, Nancy Birkner
Nano WG meeting on February 2nd, 2017 ISA-TAB-Nano Next Steps
ISA-TAB-Nano Update for the Nano WG
09 Feb 2017 | Presentations | Contributor(s): Mervi Heiskanen
Nano WG meeting on February 2nd, 2017 ISA-TAB-Nano Next Steps by the Duke team
Life after MOOCS: Online Science Education Needs a New Revolution
03 Feb 2017 | Presentations | Contributor(s): Phillip Compeau
ITCR Monthly PI Meeting, February 3, 2017 Presentation by Phillip Compeau (Carnegie Mellon U.)
Extending 3D Slicer to support ground truth pathology tissue segmentation data for integrated pathology/radiology image analysis competitions.
06 Jan 2017 | Presentations | Contributor(s): Joel Haskin Saltz, Andrey Fedorov, Jayashree Kalpathy-Cramer
ITCR PI Monthly Meeting January 6, 2017 Collaborative project goal: Improve support in 3D Slicer for pathology imaging, generate high quality, well curated “ground truth” annotations, integrate key aspects of the Stony Brook ITCR project (FeatureDB) into the MGH project and...
14 Dec 2016 | Presentations | Contributor(s): Linda Rieswijk
Nano WG December 7, 2016 presentation by Linda Rieswijk (Maastricht University).Additional relevant links not included in the presentation:Tools to convert e.g. excel files into the enanomapper RDF format here http://ambit.sourceforge.net/enanomapper/templates/convertor.htmlCollection...
Systematic pan-cancer analysis of tumour purity
05 Dec 2016 | Publications | Contributor(s): Dvir Aran
The tumour microenvironment is the non-cancerous cells present in and around a tumour, including mainly immune cells, but also fibroblasts and cells that comprise supporting blood vessels. These non-cancerous components of the tumour may play an important role in cancer biology. They also have a...
ASTM update: minimun ontology proposal
01 Dec 2016 | Presentations | Contributor(s): Frederick C. Klaessig
Nano WG Meeting December 1, 2016. • Review of interac+ons between ASTM and Nanoinforma+cs Roadmaps • Status of ASTM ‘minimum ontology’ proposal • Discussion of best means of iden+fying a “neutral, core, basic, minimum” ontology that is...
Regulatory Challenges and Opportunities for Digital Pathology
29 Nov 2016 | Presentations | Contributor(s): Nick Anderson
FDA has cleared or approved a number of digital pathology devices for different intended uses, such as digital read and image analysis of immunohistochemically stained tissue slides, classification and enumeration of peripheral blood cells, and initial screening of cervical cytology slides. ...
eNanoMapper Database, Search Tools and Templates
23 Nov 2016 | Presentations | Contributor(s): Nina Jeliazkova
Nano WG presentation, November 17, 2016