Resources: All

Find a resource
  1. nanoparticles x
  2. nciphub x
  3. itcr x
  1. Tools for Creation of Integrated Data Repository for Cancer Research

    16 Jun 2015 | Presentations | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    Admin Supplement Proposal Parent Projects: DeepPhe (PIs: Savova and Jacobson) caCDE-QA (PI: Jiang)

  2. A Semantic Web-based Quality Assurance Tool for Cancer Study Common Data Elements

    16 Jun 2015 | Presentations | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    A poster presentation from the caCDE-QA project (PI: Jiang)  

  3. Notes from the ITCR Annual Meeting May 27-28, 2015

    10 Jun 2015 | Downloads | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    Notes from the ITCR Annual Meeting May 27-28, 2015

  4. NCIP Hub QIN Workshop - March 3, 2015

    19 Mar 2015 | Presentations

    Mike McLennan, director of HUBzero, presented an overview of basic NCIP Hub functionality to the QIN group on March 3, 2015. The presentation included an overview of the "hub" and HUBzero, and touched upon functionality such as projects, groups, resources and information sharing. The...

  5. Introduction to the Trinity Cancer Transcriptome Analysis Toolkit

    05 Feb 2015 | Teaching Materials | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    This short video provides an overview of our ITCR-funded effort to leverage RNA-Seq and de novo transcriptome assembly to assist researchers in studying cancer transcriptomes.  Visit our NCGAS Trinity/Galaxy portal to access these compute...

  6. CRAVAT Introduction Video - Cancer Related Analysis of Variants

    03 Dec 2014 | Teaching Materials | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    This video provides a brief overview of the CRAVAT web service(http://www.cravat.us/).  CRAVAT provides annotation and analysis of cancer mutations. CRAVAT is free, very easy to use, and can handle large volumes of mutations.[[Youtube(xovmIy11Bcs)]]Please switch to 1080 resolution and watch...

  7. Databases on NCIP Hub

    21 Nov 2014 | Teaching Materials

    Overview and demo of the database functionality on NCIP Hub. Further documentation on database functionality is included in the "Supporting Documentation" section.

  8. Building Online Scientific Communities via NCIP Hub

    17 Nov 2014 | Teaching Materials

    Overview of how NCIP Hub can be used to build online scientific communities.

  9. Tools to Analyze Morphology and Spatially Mapped Molecular Data

    03 Oct 2014 | Presentations | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

  10. Resources on NCIP Hub

    22 Sep 2014 | Teaching Materials

    This is a presentation given as part of the NCIP Hub Webinar Series. It reviews at a high level what resources are, why and when to use them, and how to contribute.

  11. ITCR PI Meeting June 2014 Presentations

    23 Jun 2014 | Series | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    Informatics Technology for Cancer Research (ITCR) Initiative held its Annual PI Meeting on June 12-13, 2014 in Rockville, MD. This series contains the presentations given at the meeting.

  12. Why Should You Care About Accessibility of Your Contributed Content?

    02 Jun 2014 | Teaching Materials

    Most people today can hardly conceive of life without the internet. Some have argued that no other single invention has been more revolutionary since Gutenberg's printing press in the 1400s. Now, at the click of a mouse, the world can be "at your fingertips"—that is, if you...

  13. Collections on NCIP Hub

    02 Jun 2014 | Teaching Materials

    NCIP Hub Webinar Series presentation given on April 24, 2014. The presentation explains what collections are, and how and when to use them.

  14. NCIP Hub Dashboard Tutorial

    15 Apr 2014 | Teaching Materials

    This is a short "how-to" video to familiarize users with the customizable dashboard on NCIP Hub.

  15. Quantitative Image Informatics for Cancer Research (QIICR)

    04 Apr 2014 | Presentations | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando