Skip to main content

Resources: All

Find a resource
  1. nanoparticles x
  2. cancer x
  3. cancerinformatics x
  1. Introduction to the Trinity Cancer Transcriptome Analysis Toolkit

    05 Feb 2015 | Contributor(s): Brian Haas, Aviv Regev, Bill Barnett

    This short video provides an overview of our ITCR-funded effort to leverage RNA-Seq and de novo transcriptome assembly to assist researchers in studying cancer transcriptomes.  Visit our NCGAS Trinity/Galaxy portal to access these compute...

  2. Multiclass cancer diagnosis using tumor gene expression signatures

    10 Nov 2014

    Experiment Description:    The optimal treatment of patients with cancer depends on establishing accurate diagnoses by using a complex combination of clinical and histopathological data. In some instances, this task is difficult or impossible because of atypical clinical...

  3. Informatics to enable Routine Personalized Cancer Therapy (IPCT)

    18 Feb 2014 | Contributor(s): Elmer V. Bernstam, Funda Meric-Bernstam

  4. Advanced Development of TIES - A Clinical Text Search Engine

    18 Feb 2014 | Contributor(s): Rebecca Crowley

    Archived human tissues are an essential resource for translational research. Formalin-fixed, paraffin-embedded (FFPE) tissues from cancer patients are used in a wide range of assays, including RT-PCR, SNP profiling, multiplex biomarkers, imaging biomarkers, targeted exome, whole exome, and whole...

  5. Informatics Tools for High-throughput Analysis of Cancer Mutations

    15 Jan 2014 | Contributor(s): Michael C Ryan, Rachel Karchin