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  1. CERR: A Computational Environment for Radiotherapy Research

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    28 Oct 2014 | Contributor(s): Joseph Deasy

    CERR (pronounced 'sir') is a software platform for developing and sharing research results in radiation therapy treatment planning.CERR is written in the widely-used Matlab language (version 7.0 or later), allowing for low-cost development of visualization and analysis tools.CERR will...

  2. Clinical Trials Design, Development, and Outreach Working Group

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    21 Apr 2014 | Contributor(s): Richard Wahl, John Buatti, Vyshak Chandra

    Clinical Trials Design, Development, and Outreach Working Group Update

  3. Cloud Supercomputer Aided Diagnostic Imaging Decision Support System

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    18 Jun 2014 | Presentations | Contributor(s): Hiro Yoshida

    ITCR PI meeting presentation on project status.

  4. Community Adoption & Adaptation of ISA-TAB-nano Data Sharing Templates: A brief overview, next steps at CEINT, and an open discussion of priority actions

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    09 Feb 2017 | Presentations | Contributor(s): Christine Ogilvie Hendren, Nancy Birkner

    Nano WG meeting on February 2nd, 2017 ISA-TAB-Nano Next Steps 

  5. Community Adoption & Adaptation of ISA-TAB-nano Data Sharing Templates: A brief overview, next steps at CEINT, and an open discussion of priority actions

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    09 Feb 2017 | Presentations | Contributor(s): Christine Ogilvie Hendren, Nancy Birkner

    Nano WG meeting on February 2nd, 2017 ISA-TAB-Nano Next Steps 

  6. Community Health Worker Genetics Education Needs Assessment

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    23 Nov 2015 | Downloads | Contributor(s): Andria Reyes, Manuela Orjuela, Karen Schmitt, Andria Reyes, Grace Hillyer, Stephen Emerson

    Our overarching goal is to develop and establish a cancer genetics curriculum that is pertinent, culturally sensitive and understandable by a community population who is not English dominant and of a lower literacy level than that of the general New York City population. The curriculum will teach...

  7. CRAVAT - Cancer-Related Analysis of Variants Toolkit

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    23 Jun 2015 | External Applications | Contributor(s): Rachel Karchin, Michael C Ryan

    cravat is a bioinformatics pipeline : ; that performs high-throughput cancer-related analysis of variants. it : ; utilizes three applications: CHASM (Cancer-Specific Analysis of Somatic Mutations), VEST and SVN-Get. More information on these tools is available at CHASM Software.Release...

  8. CRAVAT Introduction Video - Cancer Related Analysis of Variants

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    03 Dec 2014 | Teaching Materials | Contributor(s): Michael C Ryan

    This video provides a brief overview of the CRAVAT web service(http://www.cravat.us/).  CRAVAT provides annotation and analysis of cancer mutations. CRAVAT is free, very easy to use, and can handle large volumes of mutations.[[Youtube(xovmIy11Bcs)]]Please switch to 1080 resolution and watch...

  9. Data Acquisition Working Group

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    21 Apr 2014 | Presentations | Contributor(s): Tom Chenevert, Paul Kinahan

    DA-WG Update on PET-CT and DWI MRI

  10. Data Collection from the Nanotoxicology Literature Using ISA-TAB-Nano

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    21 Jan 2016 | Presentations | Contributor(s): Richard Liam Marchese Robinson

    Nano WG meeting January 21, 2016 This is an updated version of the talk originally delivered at the CompNanoTox2015 conference. [1] Marchese Robinson, R.; Richarz, A.N.; Cassano, A.; Cronin, M.T.D; Rallo, R. (2015): Data Collection from the Nanotoxicology Literature Using ISA-TAB-Nano. FigShare....

  11. Data Collection from the Nanotoxicology Literature Using ISA-TAB-Nano

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    21 Jan 2016 | Presentations | Contributor(s): Richard Liam Marchese Robinson

    Nano WG meeting January 21, 2016 This is an updated version of the talk originally delivered at the CompNanoTox2015 conference. [1] Marchese Robinson, R.; Richarz, A.N.; Cassano, A.; Cronin, M.T.D; Rallo, R. (2015): Data Collection from the Nanotoxicology Literature Using ISA-TAB-Nano. FigShare....

  12. Data Management: The appproach in NANoREG and ProSafe

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    21 Apr 2016 | Presentations | Contributor(s): Sara Totaro, Hugues Crutzen

    NANoREG project is working on establishing a common European approach to the regulatory testing of Manufactured Nanomaterials and ProSafe has been designed to coordinate and support the aims of EU member and associated states in their EU and international efforts regarding risk assessment,...

  13. Data Management: The appproach in NANoREG and ProSafe

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    21 Apr 2016 | Presentations | Contributor(s): Sara Totaro, Hugues Crutzen

    NANoREG project is working on establishing a common European approach to the regulatory testing of Manufactured Nanomaterials and ProSafe has been designed to coordinate and support the aims of EU member and associated states in their EU and international efforts regarding risk assessment,...

  14. Data Reproducibility Nanotechnology Knowledge Infrastructure Data Curation

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    05 Dec 2014 | Presentations | Contributor(s): Martin Fritts

    Nano WG presentation on December 4, 2014

  15. Data Sharing and the Electronic NanoBook (eNanobook)

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    20 Nov 2017 | Presentations | Contributor(s): Alexander Tropsha, Fred Prior

    Sustainable research progress in many if not all scientific disciplines critically depends on the existence of robust specialized databases that integrate and structure all available experimental information in the respective fields. The need for such reference databases is especially critical...

  16. Data Sharing and the Electronic NanoBook (eNanobook)

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    20 Nov 2017 | Presentations | Contributor(s): Alexander Tropsha, Fred Prior

    Sustainable research progress in many if not all scientific disciplines critically depends on the existence of robust specialized databases that integrate and structure all available experimental information in the respective fields. The need for such reference databases is especially critical...

  17. Data, Metadata and "Data Quality" for Databases

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    05 Dec 2014 | Presentations | Contributor(s): Frederick C. Klaessig, Mervi Heiskanen

    Nano WG December 4, 2014

  18. Dataset Curation, Assessment of their Quality, and Prediction Model Developments for Safe and Sustainable Nanotechnology (S2NANO)

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    29 Nov 2018 | Presentations | Contributor(s): Tae Hyun Yoon

    Nano WG November 29, 2018: Tae Hyun Yoon, Prof./CEO/Ph.D., Yoon Idea Lab. Co. Ltd. & Hanyang University In this presentation, I will introduce our recent research outcomes from S2NANO: PredictNANO project, which aimed to bridge the nanosafety knowledge gaps between R&D...

  19. Design and Applications of the CEINT Database

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    10 Sep 2014 | Presentations | Contributor(s): Sandra Karcher, Yuan Tian

    Nano WG presentation September 4, 2014Post-doctoral research associates Dr. Sandra Karcher and Dr. Yuan Tian, Duke University

  20. Development of natural language processing tools for nanoparticle design

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    05 Mar 2019 | Presentations | Contributor(s): Nastassja Lewinski

    Nano WG February 28, 2019: In this presentation, an introduction to the application of natural language processing techniques to nanotechnology data will be discussed.  Natural language processing tools can aid in the automatic categorization, extraction, and analysis of data from...