Hub Zero Status Update

21 Apr 2014 | Presentations | Contributor(s): Jayashree Kalpathy-Cramer, Vyshak Chandra

NCIP Hub, an environment to facilitate collaboration within the Quantitative Imaging Network

Human Disease Ontology

21 Sep 2016 | External Applications | Contributor(s): Lynn Schriml

The Disease Ontology has been developed as a standardized ontology for human disease, since 2003, with the purpose of providing the biomedical community with manual curated, consistent, reusable and sustainable descriptions of human disease terms, phenotype characteristics and related...

Image Analysis and Performance Metrics WG - DW and DCE MRI Update

21 Apr 2014 | Presentations | Contributor(s): Wei Huang, Tom Chenevert, Vyshak Chandra

IAPM-WG - DW and DCE MRI Update

Image Analysis and Performance Metrics WG - PET/CT Update

21 Apr 2014 | Presentations | Contributor(s): Jayashree Kalpathy-Cramer, Vyshak Chandra

IAPM-WG PET/CT Update

Introduction to the Trinity Cancer Transcriptome Analysis Toolkit

05 Feb 2015 | Teaching Materials | Contributor(s): Brian Haas, Aviv Regev, Bill Barnett

This short video provides an overview of our ITCR-funded effort to leverage RNA-Seq and de novo transcriptome assembly to assist researchers in studying cancer transcriptomes.  Visit our NCGAS Trinity/Galaxy portal to access these compute...

Jaqpot - An open-source web platform for creating, using, testing and sharing predictive models in nano-informatics

20 Jun 2019 | Presentations | Contributor(s): Haralambos Sarimveis

Nano WG June 20, 2019Computational models that predict physicochemical properties, biokinetics or adverse biological effects of Engineered Nanomaterials (ENMs) are becoming increasingly important to support risk assessment and safety-by-design. This is primarily due to cost-saving and...

Multiclass cancer diagnosis using tumor gene expression signatures

10 Nov 2014 | Downloads

Experiment Description:    The optimal treatment of patients with cancer depends on establishing accurate diagnoses by using a complex combination of clinical and histopathological data. In some instances, this task is difficult or impossible because of atypical clinical...

NANOANALYTICS OF EXTRACELLULAR VESICLES – Standards for isolation, characterization and reporting

26 May 2017 | Presentations | Contributor(s): Shivani Sharma

Nano WG presentation on May 25, 2017. Presentation by Dr.  Shivani Sharma, Associate Director of the Nano Pico Characterization Lab, UCLA. Nanoscale characterization of exosomes and their use disease biomarkers and drug delivery agents

NanoInformatics Knowledge Commons Curation Team: Building the Data Dictionary to Enrich Data Curation

11 Jul 2018 | Presentations | Contributor(s): Jaleesia Amos, Yuan Tian, Mervi Heiskanen

Nano WG Presentation, May 31st, 2018 Organized storing of data using informed-decision making to determine what information should be curated, when data curation is complete, and how to identify high-quality data. Purpose of NIKC structure & curation process: tell the story of...

NCIP Hub QIN Workshop - March 3, 2015

19 Mar 2015 | Presentations | Contributor(s): Michael McLennan

Mike McLennan, director of HUBzero, presented an overview of basic NCIP Hub functionality to the QIN group on March 3, 2015. The presentation included an overview of the "hub" and HUBzero, and touched upon functionality such as projects, groups, resources and information sharing. The...

Overview on HUBzero - Building Scientific Communities Online

03 Sep 2013 | Teaching Materials | Contributor(s): Michael McLennan

This is a white paper/publication on the HUB and how one can build online communities using the HUBzero platform. See the tab on supporting documents for a video presentation.

Overview: The HUBzero Platform for Scientific Collaboration

18 Dec 2013 | Presentations | Contributor(s): Michael McLennan

This web site was created using a collaborative infrastructure called HUBzero, developed by Purdue University. HUBzero is the basis of nanoHUB.org and more than 50 other sites covering a wide range of scientific disciplines, including bio-fuels, microelectromechanical systems, cancer research,...

Patient Stories

30 Nov 2015 | Teaching Materials | Contributor(s): Diane Townsel

Beaumont’s Patient videos: is the story of five patients that have participated in clinical research or have been a part of a bio-specimen study. The videos tell the unique stories of our patients and how our Cancer Clinical Trials staff build relationships with our patients and guide them...

Por Nuestras Hijas/For Our Daughters HPV Program

24 Nov 2015 | Teaching Materials | Contributor(s): Maria E. Fernandez

The Por Nuestras Hijas/For Our Daughters HPV program is an interactive, culturally appropriate HPV education program which includes a print fotonovela and a tailored interactive multimedia intervention (TIMI). The TIMI runs on iPads and also available on the web and mobile platforms. The program...

QIBA Status

21 Apr 2014 | Presentations | Contributor(s): Daniel Sullivan, Vyshak Chandra

Status and potential for further collaboration with RSNA QIBA

QIN HUBzero update

28 Oct 2013 | Teaching Materials | Contributor(s): Jayashree Kalpathy-Cramer

presentation for the QIN EC meeting 10/21/2013