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NanoInformatics Knowledge Commons Curation Team: Building the Data Dictionary to Enrich Data Curation
11 Jul 2018 | Presentations | Contributor(s): Jaleesia Amos, Yuan Tian, Mervi Heiskanen
Nano WG Presentation, May 31st, 2018 Organized storing of data using informed-decision making to determine what information should be curated, when data curation is complete, and how to identify high-quality data. Purpose of NIKC structure & curation process: tell the story of...
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NCI Alliance for Nanotechnology in Cancer, and caNanoLab: A Data Repository for Cancer Nanomedicines
27 Nov 2018 | Presentations | Contributor(s): Luisa Russell, Mervi Heiskanen
Nano WG presentation November15, 2018 NCI Alliance for Nanotechnology in Cancer –Structure–Achievements–Scientific FocuscaNanoLab–Intro to Platform–Data Curation–User Statistics–Future Directions
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NCIP Hub QIN Workshop - March 3, 2015
19 Mar 2015 | Presentations | Contributor(s): Michael McLennan
Mike McLennan, director of HUBzero, presented an overview of basic NCIP Hub functionality to the QIN group on March 3, 2015. The presentation included an overview of the "hub" and HUBzero, and touched upon functionality such as projects, groups, resources and information sharing. The...
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Next-Generation Clustered Heat Maps (NG-CHM)
07 Oct 2015 | Presentations | Contributor(s): Weinstein John, Bradley Broom
Clustered Heat Maps (CHMs) have been referred to as the ubiquitous visual icons of post-genomic biology -- the most frequent type of visualization for large molecular profiling databases. However, “traditional” CHMs are static images -- a serious limitation. Accordingly, we have now...
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Notes from the ITCR Annual Meeting May 27-28, 2015
10 Jun 2015 | Downloads | Contributor(s): Ishwar Chandramouliswaran, Juli Klemm
Notes from the ITCR Annual Meeting May 27-28, 2015
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Open source diffusion MRI technology for brain cancer research
07 Oct 2015 | Presentations | Contributor(s): Lauren O\'Donnell
Using measurements of water diffusion, dMRI can give unique insights into the microstructure and cellular orientation of tissues. There is a growing awareness in the neurosurgery community that diffusion models must move beyond the current clinical standard of the diffusion tensor for better...
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Overview on HUBzero - Building Scientific Communities Online
03 Sep 2013 | Teaching Materials | Contributor(s): Michael McLennan
This is a white paper/publication on the HUB and how one can build online communities using the HUBzero platform. See the tab on supporting documents for a video presentation.
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Pathology Image Informatics Platform for visualization, analysis and management
07 Oct 2015 | Presentations | Contributor(s): Metin Gurcan, Anant Madabhushi, Anne Martel
This multi-institutional proposal seeks to expand on an existing, freely available pathology image viewer (Sedeen Image Viewer) to create a pathology informatics platform (PIIP) for managing, annotating, sharing, and quantitatively analyzing digital Pathology Imaging (DPI) data. Sedeen has become...
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PET/CT Working group update at QIN F2F 2014
24 Mar 2014 | Downloads | Contributor(s): Jayashree Kalpathy-Cramer
Update of the QIN PET/CT WG
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Providing National Cyberinfrastructure to Biologists, esp. Genomicists
02 Sep 2016 | Presentations | Contributor(s): Tom Doek, Mervi Heiskanen
National Center for Genome Analysis Support (NCGAS) provides access to High Performance Computing resources for biologists. NCGAS also maintains a curated set of applications and Galaxy instances of their software, as well as provides bioinformatics expertise.
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QIBA Status
21 Apr 2014 | Presentations | Contributor(s): Daniel Sullivan, Vyshak Chandra
Status and potential for further collaboration with RSNA QIBA
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QIN HUBzero update
28 Oct 2013 | Teaching Materials | Contributor(s): Jayashree Kalpathy-Cramer
presentation for the QIN EC meeting 10/21/2013
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QIN HUBzero update
28 Oct 2013 | Teaching Materials | Contributor(s): Jayashree Kalpathy-Cramer
presentation for the QIN EC meeting 10/21/2013
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QIN Software tools inventory summary
20 Jan 2015 | Downloads | Contributor(s): Andrey Fedorov
Abstract QIN Tools survey has been conducted in two iterations starting from the Spring 2014 [1]. In the beginning of Summer 2014, a revised version of the survey has been released [2]. The results of the survey are available at [3], and also include the analysis of other data sources (such as...
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QIN Tools Inventory Summary
15 Oct 2014 | Teaching Materials | Contributor(s): Andrey Fedorov
QIN Tools survey has been conducted in two iterations starting from the Spring 2014 [1]. In the beginning of Summer 2014, a revised version of the survey has been released [2]. The results of the survey are available at [3], and also include the analysis of other data sources (such as “QIN...
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Quantitative Image Informatics for Cancer Research (QIICR)
04 Apr 2014 | Presentations | Contributor(s): Andrey Fedorov, Ron Kikinis
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Quantitative Image Informatics for Cancer Research (QIICR)
04 Apr 2014 | Presentations | Contributor(s): Andrey Fedorov, Ron Kikinis
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Quantitative Imaging Network (QIN) in China
18 Apr 2014 | Presentations | Contributor(s): Yan Kang
A presentation on challenges & opportunities for QIN in China
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Quantitative Imaging Network(QIN) BIDS Related Tools
27 Oct 2014 | Downloads | Contributor(s): Andrey Fedorov, Thomas Casavant
An inventory of the software tools used by the QIN sites to facilitate collaborative efforts such as sharing of analysis results and software tools.
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Slicer Update
21 Apr 2014 | Presentations | Contributor(s): Andrey Fedorov, Ron Kikinis
Status of the Slicer Informatics (U24): Potential for WG Interactions