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  1. Nanoinformatics Workshop 2015

    23 Mar 2015 | Contributor(s): Mark Tuominen, Mervi Heiskanen

    Nano WG March 19, 2015.

  2. Nanoinformatics: research and education

    17 Jun 2016 | Presentations | Contributor(s): Victor Maojo

    Nano WG June 2, 2016.  Text mining of nanotoxicity literature (Victor Maojo)  

  3. Nanomaterial Registry Update

    22 Oct 2015 | Presentations | Contributor(s): Karmann Mills, Anthony Hickey, Alexander Tropsha

    Nano WG weekly meeting October 22,2015

  4. Nanomaterial-Biological Interactions Knowledgebase

    21 Jan 2016 | Presentations | Contributor(s): Stacey L Harper

    Nano WG January 14, 2016 The NBI Knowledgebase is intended to offer industry, academia, the general public, and regulatory agencies a mechanism to rationally inquire for unbiased interpretation of nanomaterial exposure effects in biological systems. The knowledgebase serves as a repository for...

  5. NCI Standard CRFs

    15 Mar 2014 | Teaching Materials | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    Working in conjunction with NCI has developed a collection of Standard Case Report Forms (CRFs) for use in developing new protocols. The project and its status are described here. The reuse of sections from standard CRFs helps to ensure that data collected in different studies is compatible and...

  6. Performance Status Scoring : a standards portal resource

    15 Mar 2014 | Teaching Materials | Contributor(s): Ann Christine Catlin, Sumudinie fernando, Denise Warzel, Angela Kummerow

    The scoring scale used may depend on patient population, disease, study goals and other criteria. Many definitions of the scale scoring do not match the standard.What is Performance Status?Performance status attempts to quantify the general well-being of cancer and other patients. The score...

  7. pRainBow optical barcoding library

    14 Aug 2014 | Reagents | Contributor(s): Andries Zijlstra

    Note: this is a work in progress. About: pRainBow is a library of lentiviral vectors designed to allow for fluorescent labeling of cells with one of 7 distinct fluorescent proteins. Composition: How to obtain: How to cite: Other information:Good global...

  8. Rationale for Creating an International Forum and NCI Funding Opportunities

    18 Apr 2014 | Presentations | Contributor(s): Larry Clarke

    The topic here is the creation of research networks and their value to cancer research.The Cancer Imaging Program, is administering several research networks. This presentation on the creation and value of two of them (The Network for Translational research or NTR, and the Quantitative Imaging...

  9. Report to the DICOM Standards Committee - December 4, 2015

    10 Dec 2014 | Downloads | Contributor(s): Joseph Kalen

  10. Screening for Small Molecules: Target Discovery Against miRNAs for Breast Cancer Treatment

    18 Aug 2015 | Presentations | Contributor(s): Odemaris Narvaez del Pilar

    Breast cancer is one of the leading causes of cancer related deaths and morbidity among women worldwide. Identifying new targets and developing new therapies is very important in order to improve patient outcomes and minimize this health burden. MicroRNAs, a type of non-coding RNA, are potential...

  11. So What Can We Do With Nano Informatics? – Leveraging Decision Analytic Tools

    22 Jan 2015 | Presentations | Contributor(s): Igor Linkov, Matthew Bates

    Jan 22, 2015 meeting                  Nanotechnology Working Group Matthew E. Bates & Igor Linkov Risk & Decision Science Team Environmental Laboratory, Engineer Research and Development Center, US Army...

  12. Some Thoughts on Reproducibility

    05 Dec 2014 | Presentations | Contributor(s): John Rumble

    Nano WG December 4, 2014

  13. Standards Portal CDEs Complete View

    15 Mar 2014 | Teaching Materials | Contributor(s): Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    This DataView on this resource page is used to explore the Standards Portal CDEsUse the DataView provided on this resource page to navigate, browse, search, explore and download the complete set of columns for NCI common data elements standards at the Hub. These CDEs are brought to the Hub for...

  14. Standards Portal CRFs Common Data Fields

    19 Mar 2014 | Downloads | Contributor(s): Denise Warzel, Sumudinie fernando, Ann Christine Catlin

    This DataView is for the Common Data Fields of the Standards Portal CRFsUse this DataView to browse, search, explore and download the essential set of columns for NCI case report form standards at the Hub. These CRFs were brought to the Hub for clarification, discussion and discovery. They were...

  15. Standards Portal CRFs Complete View

    19 Mar 2014 | Downloads | Contributor(s): Denise Warzel, Sumudinie fernando, Ann Christine Catlin

    This DataView resource page is for the Standards Portal CRFsUse this DataView to browse,search, explore and download the complete set of columns for NCI case report form standards at the Hub. These CRFs were brought to the Hub for clarification, discussion and discovery. They were assembled by...

  16. Standards Portal Vocabulary DataView

    15 Mar 2014 | Teaching Materials | Contributor(s): Sherri de Coronado, Denise Warzel, Ann Christine Catlin, Sumudinie fernando

    The DataView for terminology referenced/used by the CDEs and CRFs currently contained in the Standards PortalThe DataView on this resource page can be used to browse, search, explore and download the NCI concepts for vocabulary referenced by the CDEs and CRFs uploaded to the Standards Portal....

  17. Support Access to NPO's Structure and Content

    13 Aug 2015 | Presentations | Contributor(s): Michael Halper, Vladimir Ventura, Yehoshua Perl

    •Abstraction Networks (“AbNs”) for Ontologies•Two example AbNs:–Area taxonomy–Partial-area taxonomy•BLUOWL: taxonomy-based software tool•Application to the NPO•Conclusions

  18. TCGA Common Data Elements

    15 Mar 2014 | Teaching Materials | Contributor(s): Ann Christine Catlin, Sumudinie fernando, Denise Warzel

    TCGA Common Data ElementsTCGA version 2.6 CDEs are the standard elements that were used in validation of clinical data in the TCGA 2.6 data files. The data files are available for download at the Data Matrix. This resource page at the NCIP HUB presents the CDEs for easy search and discovery....

  19. Text Mining, Data Mining and Molecular Dynamics Simulations for in Silico Design of PAMAM Dendrimers

    17 Jun 2016 | Presentations | Contributor(s): Julio Facelli

    Nano WG June 16, 2016 Text Mining, Data Mining and Molecular Dynamics Simulations for in Silico Design of PAMAM Dendrimers by Julio Facelli

  20. The impact of engineered nanomaterials on aquatic species: ISA-TAB compatible dataset mined from literature (2007-2016)

    13 Jun 2017 | Presentations | Contributor(s): Anastasios Papadiamantis

    Nano WG presentation, June 8, 2017Primary scope of the project was to: Model the toxicity of engineered nanomaterials (ENMs) at multiple levels and design and create a database (DB) containing extracted peer-reviewed published toxicity dataAnalyse the extracted data and identify...