National Cancer Informatics Program (NCIP) Hub has been renamed to the NCI Community Hub. Along with a new name and URL (ncihub.org) the NCI Community Hub has a modernized and user-friendly homepage. The old URL will be automatically and permanently redirected starting from the release date, July 7, 2019.

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  1. An Interactive Resource to Probe Genetic Diversity and Estimated Ancestry in Cancer Cell Lines

    26 Jun 2019 | Contributor(s): Anil Wali

    An Interactive Resource to Probe Genetic Diversity and Estimated Ancestry in Cancer Cell Lines

  2. Geant4 - A Simulation Toolkit

    20 Jun 2019 | Contributor(s): Sachin Dev

    Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science.

  3. Jaqpot - An open-source web platform for creating, using, testing and sharing predictive models in nano-informatics

    20 Jun 2019 | Contributor(s): Haralambos Sarimveis

    Nano WG June 20, 2019Computational models that predict physicochemical properties, biokinetics or adverse biological effects of Engineered Nanomaterials (ENMs) are becoming increasingly important to support risk assessment and safety-by-design. This is primarily due to cost-saving and...

  4. Transitioning to Predictive Analysis for Nanoparticle Biocorona Studies

    14 May 2019 | Contributor(s): Korin Wheeler

    Nano WG April 18, 2019: Proteins adsorbed to nanomaterials in a biological environment mediate cellular recognition, uptake, and toxicity of nanomaterials. Here, Dr. Korin Wheeler presents the development of experimental methods to characterize this population of proteins (also...

  5. Accelerating Nanotech Innovations Through a Safer-By-Design Approach, Safer Nanomaterials School

    14 May 2019 | Contributor(s): Philippe Sabatier

    Nano WG May 9, 2019European Scientific Institute (ESI) Safer Nanomaterials School Introduction.

  6. The history of chemical information and the materials of the future

    25 Apr 2019 | Contributor(s): Evan Hepler-Smith

    Techniques, technologies, cultures, and infrastructures of information management played a central role in the development of the modern chemical sciences and the global chemicals industry since the late 19th century. Chemical databases and analytical techniques that privileged abstract,...

  7. FAIR for NanoSafety: where do we stand?

    05 Apr 2019 | Contributor(s): Egon Willighagen

    Nano WG April 4, 2019 Findable, Accessible, Interoperable, Reusable (FAIR) sharing of nanosafety data.

  8. European Open Science Cloud: Concept and opportunities

    26 Mar 2019 | Contributor(s): Gergely Sipos

    EOSC-hub is a 33 million Euro H2020 project that started in January 2018 with the involvement of over 100 institutes. In three years the project establishes the first elements of the European Open Science Cloud (EOSC) – the infrastructure aimed to accelerate and support the current...

  9. A multi-modal data resource for investigating geographic heterogeneity in patient-derived xenograft tumors

    13 Mar 2019 | Contributor(s): Satwik Rajaram, Maike Roth, Julia Malato, Scott Vandenberg, Byron Hann, Chloe E. Atreya, Steven J. Altschuler, Lani F. Wu

    PSON0010 Cancer Sampling Index – CaSIXStudy Contact: Lani Wu lani.wu@ucsf.eduDownload the dataset at ftp://caftpd.nci.nih.gov/psondcc/casix/Studies using Patient Derived Xenograft (PDX) models of human cancer permit a wider range of experimental approaches to measure...

  10. Development of Targeted Nanomedicines via Machine Learning Processes

    05 Mar 2019 | Contributor(s): Daniel Heller

    Nano WG February 21, 2019Description: We are using data science to facilitate the development of nanoparticle drugs incorporating kinase inhibitors with diverse chemical structures. Doing this work inspired us to bring together the nanoinformatics community...

  11. Development of natural language processing tools for nanoparticle design

    05 Mar 2019 | Contributor(s): Nastassja Lewinski

    Nano WG February 28, 2019: In this presentation, an introduction to the application of natural language processing techniques to nanotechnology data will be discussed.  Natural language processing tools can aid in the automatic categorization, extraction, and analysis of data from...

  12. Innovative Nanoinformatics models and tools: towards a Solid, verified and Integrated Approach to Predictive (eco)Toxicology (NanoSolveIT)

    04 Feb 2019 | Contributor(s): Antreas Afantitis

    Nano WG January 17, 2019NanoSolveIT (a new H2020 nanoinformatics project) aspires to introduce a ground-breaking in silico Integrated Approach to Testing and Assessment (IATA) for the environmental health and safety of Nanomaterials (NM), implemented through a decision support system packaged...

  13. nano-Ag: PBTK Models, Vblood & NIOSH

    04 Feb 2019 | Contributor(s): Frederick C. Klaessig, Mervi Heiskanen

    Nano WG: January 31, 2019Nanoinformatics and computational models1.Examine a nano-Ag0 computational model used in a regulatory context2.SCCS has a nano-silver opinion3.NIOSH time period overlaps with the nanoinformatics roadmap4.NIOSH a case study for roadmap’s...

  14. NanoWG: Introduction to Luisa Russell, Nano WG Co-Chair

    14 Dec 2018 | Presentations | Contributor(s): Luisa Russell

    Nano WG December 13, 2018 Luisa Russell, Ph.D. Nanodelivery Systems and Devices Branch Cancer Imaging Program National Cancer Institute/National Institutes of Health

  15. Improving emerging technologies content on Wikipedia, or, what to do when someone is wrong on the Internet

    07 Dec 2018 | Presentations | Contributor(s): John P. Sadowski

    Nano WG December 6, 2018As one of the first places many people look up information on health and safety, including with emerging technologies like nanotechnology, it is important for Wikipedia to contain information that is complete, up to date, and free of errors.  Since 2012, NIOSH has...

  16. Dataset Curation, Assessment of their Quality, and Prediction Model Developments for Safe and Sustainable Nanotechnology (S2NANO)

    29 Nov 2018 | Presentations | Contributor(s): Tae Hyun Yoon

    Nano WG November 29, 2018: Tae Hyun Yoon, Prof./CEO/Ph.D., Yoon Idea Lab. Co. Ltd. & Hanyang University In this presentation, I will introduce our recent research outcomes from S2NANO: PredictNANO project, which aimed to bridge the nanosafety knowledge gaps between R&D...

  17. NCI Alliance for Nanotechnology in Cancer, and caNanoLab: A Data Repository for Cancer Nanomedicines

    27 Nov 2018 | Presentations | Contributor(s): Luisa Russell, Mervi Heiskanen

    Nano WG presentation November15, 2018 NCI Alliance for Nanotechnology in Cancer –Structure–Achievements–Scientific FocuscaNanoLab–Intro to Platform–Data Curation–User Statistics–Future Directions

  18. NCIP Hub: Collaboration Tool for NCI Affiliated Programs and Investigators

    16 Nov 2018 | Presentations | Contributor(s): Mervi Heiskanen, Aparna Vinodh

    NCIP Hub overview and CRCHD PACHE Hub demonstration.

  19. Some thoughts on our progress in defining and advancing nanoinformatics

    06 Nov 2018 | Presentations | Contributor(s): Mark D Hoover

    Nano WG presentation November 1, 2018 by Mark Hoover, NIOSH Discussion on Nano WG accomplishments, goals and future directions.

  20. MetaMorpheus

    05 Oct 2018 | Tools | Contributor(s): Anthony J Cesnik, Michael Shortreed

    Bottom-up proteomics database search software with integrated posttranslational modification (PTM) discovery capability.