== '''Draft Agenda for Annual Meeting:''' == == '''Day One''' == 8:00 '''Registration & Breakfast''' 8:30 '''U24 Genomic Projects Perspective:''' Brief presentations and Panel Discussion. Discussion topics to include engagement with users; considerations for transitioning to early prototype to broadly used software; obstacles to success * Trinity: Transcriptome assembly for genetic and functional analysis of cancer * Cancer Genomics:Integrative and Scalable Solutions in R / Bioconductor * NDEx - the Network Data Exchange A Network Commons for Biologists * Cloud Based Resource for Data Hosting, Visualization and Analysis Using UCSC Xena 10:00 ''Break'' 10:15 '''Industry Panel:''' Discussion topics to include considerations for using open source software; collaborations with academic groups; overall informatics needs 12:00 ''Lunch'' 1:00 '''U24 Clinical Projects Perspective''' - Brief presentations and panel discussion. Discussion topics to include engagement with users; considerations for transitioning to early prototype to broadly used software; obstacles to success * Advanced Development of TIES-Enhancing Access to Tissue for Cancer Research * Informatics Tools for Optimized Imaging Biomarkers for Cancer Research & Discovery * Cancer Deep Phenotype Extraction from Electronic Medical Records * Quantitative Image Informatics for Cancer Research (QIICR) * Tools to Analyze Morphology and Spatially Mapped Molecular Data 2:30 ''Break'' 2:45 '''Flash Talks:''' New projects promoting posters # Computational Framework for Single-Cell Genomics of Tumors # Informatics Links between Histological Features and Genetics in Cancer # Advanced Development of an Open-source Platform for Web-based Integrative Digital Image Analysis in Cancer # !GenePattern Notebooks for Cancer Research # Informatics Quantitative Radiomics System Decoding the Tumor Phenotype 3:15 '''Poster Sessions and Demos''' (11 demos) * Demos by U01 and U24 projects (excluding new awardees), two running simultaneously, 20 min each * Posters by new projects; U01 and U24 invited but not “required” 6:00 '' Dinner'' == '''Day Two''' == 8:30 ''' Keynote''' – Stephen Friend 9:15 '''Panel Discussion:''' 5 U01 Projects: Brief presentations and panel discussion. Discussion topics to include: * Challenges in early stage development * Recruiting users and community at the early stages of a project * (additional topics) 10:45 ''Break'' 11:00 '''Poster Sessions and Demos''' (11 demos) * Demos by U01 and U24 projects (excluding new awardees), two running simultaneously, 20 min each * Posters by new projects; U01 and U24 invited but not “required” 12:30 ''Lunch'' 1:30 Poster sessions and demos (''continued'') 2:30 Presentations on funded collaborations and new proposals 3:30 Activities of the Training and Outreach Working Group 4:00 Closing remarks and adjourn