Skip to main content
The NCI Community Hub will be retiring in May 2024. For more information please visit the NCIHub Retirement Page:https://ncihub.cancer.gov/groups/ncihubshutdown/overview
close

Session Chairs

Eric Stahlberg, Frederick National Laboratory for Cancer Research

Thomas J. Barr, Nationwide Children's Hospital

Patricia Kovatch, Icahn School of Medicine at Mount Sinai

Sunita Chandrasekaran, University of Delaware                              

 

9:00am–9:10am

Introduction – Fourth Computational Approaches for Cancer Workshop (CAFCW18)

9:10am–10:00am

Morning Keynote – Computational Approaches in Clinical Applications

Presenter

Ketan Paranjape

10:00am–10:30am

Morning Break

10:30am–11:00am

Developing a Reproducible WDL-Based Workflow for RNASeq Data Using Modular, Software Engineering-Based Approaches

Author/Presenters

Scott Cukras

Fredrik Pettersson

Yonghong Zhang

Ling Cen

Jamie Teer

Steven Eschrich

11:00am–11:15am

Safety, Reproducibility, Performance: Accelerating Cancer Drug Discovery with Cloud, ML, and HPC Technologies

Author/Presenter

Amanda J. Minnich

11:15am–11:45am

The Gen3 Approach to Portability and Repeatability for Cancer Genomics Projects Author/Presenters

Zac Flamig

Yajing Tang

Robert L. Grossman

11:45am–12:00pm

Scalable Deep Ensemble Learning for Cancer Drug Discovery

Author/Presenters

Sam Ade Jacobs

Tim Moon

Brian C. Van Essen

12:00pm–12:30pm

Panel Discussion: Reproducibility and Accessibility–Challenges and Opportunities

12:30pm–2:00pm

Lunch Break

2:00pm–3:00pm

Afternoon Keynote – Genomic Profiling of Normal, Premalignant, and Heterogeneous Tissues in Cancer Patients

Presenter

Paul Scheet

3:00pm–3:30pm

Workshop Afternoon Break

3:30pm–4:00pm

HPC-Based Hyperparameter Search of MT-CNN for Information Extraction from Cancer Pathology Reports

Author/Presenters

Hong-Jun Yoon

Mohammed Alawad

Blair Christian

Jacob Hinkle

Arvind Ramanathan

Georgia Tourassi

4:00pm–4:15pm

Toward a Computational Simulation of Circulating Tumor Cell Transport in Vascular Geometries

Author/Presenters

John Gounley

Erik W. Draeger

Amanda Randles

4:15pm–4:45pm

Hummingbird: Efficient Performance Prediction for Executing Genomics Applications in the Cloud

Author/Presenters

Utsab Ray

Frank Mueller

Amir Bahmani

Vandhana Krishnan

4:45pm–5:00pm

Toward a Pre-Cancer Image Atlas through Crowdsourcing and Machine Learning

Author/Presenters

Ashish Mahabal

David Liu

Luca Cinquini

Daniel Crichton

Heather Kincaid

Sean Kelly

Kristen Anton

Maureen Colbert

Christopher Amos

Matthew Schabath

Christos Patriotis

Sudhir Srivastava

5:00pm–5:30pm

Extending Frontiers for Computing in Cancer – Special Session

 

Created by Petrina Hollingsworth Last Modified Wed August 12, 2020 1:24 pm by Petrina Hollingsworth